fitgene.sge

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#!/bin/bash
#
#//
#//    Copyright 2009 Sebastian Neubert
#//
#//    This file is part of rootpwa
#//
#//    rootpwa is free software: you can redistribute it and/or modify
#//    it under the terms of the GNU General Public License as published by
#//    the Free Software Foundation, either version 3 of the License, or
#//    (at your option) any later version.
#//
#//    rootpwa is distributed in the hope that it will be useful,
#//    but WITHOUT ANY WARRANTY; without even the implied warranty of
#//    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
#//    GNU General Public License for more details.
#//
#//    You should have received a copy of the GNU General Public License
#//    along with rootpwa.  If not, see <http://www.gnu.org/licenses/>.
#//
#
# Select queue
#$ -l medium=TRUE,h_vmem=200M
# Divert output
#$ -o /nfs/nas/user/sneubert/LOGS
# Write error in same file
#$ -j y

# this script is a copy of rootfitBatch.sge modified to be used by the 
# genetic algorithm for waveset evolution

# WLIST and FITDIR have to be set before this script can be run
test -z $FITDIR && echo "fitgene.sh :: FITDIR not set! Aborting" && exit;
test -z $WLIST && echo "fitgene.sh ::  WLIST not set! Aborting" && exit;

export MYBATCH=1000.1360 # will be used of no array job is started

# batches for array job
BATCHARRAY=( 0000.0000 1000.1360 1360.1600 1600.1840 1840.2080 2080.2320 2320.2560 2560.3040 3040.3520 3520.4000 )

#BATCHARRAY=( 0000.0000  500.820 820.1020 1020.1180 1180.1300 1300.1420 1420.1540 1540.1660 1660.1820 1820.2020 2020.2500 )

if [ -n "$SGE_TASK_ID" ]
then
   export BATCH=${BATCHARRAY[$SGE_TASK_ID]};
else
   export BATCH=$MYBATCH;
fi

#export BINS=/lustre/e18/user/sneubert/Q3PiData/BATCHES/$BATCH
export BINS=/afs/e18/compass/analysis/sneubert/5PiLTBatches3/$BATCH
export OUTFILE=$BATCH.result.root
export RANK=1
export RENORM=-N
export NORM=norm.int
export ACC="-a accnorm.int"
export ACCEVENTS="-A 100000"

cd ~/scratch/COMPASS/rootpwa/trunk/
source setup.sh
cd scripts/

./rootfitBatch.sh $BINS